Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL1A1P02452 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 SELENOWP1-201ENST00000322792 252 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 RNA5SP132-201ENST00000364725 118 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 MIR1178-201ENST00000408396 91 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 AC015977.1-201ENST00000418887 292 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 TUBB4BP6-201ENST00000437576 479 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.27□□□□□ -1.25
COL1A1P02452 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.27□□□□□ -1.25
COL1A1P02452 RPS7P3-201ENST00000443360 580 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.27□□□□□ -1.25
COL1A1P02452 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 RPS23P6-201ENST00000466136 431 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 AC023245.1-201ENST00000468501 517 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.27□□□□□ -1.25
COL1A1P02452 OR7E158P-201ENST00000524483 910 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.27□□□□□ -1.25
COL1A1P02452 AC022404.1-201ENST00000555320 273 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.27□□□□□ -1.25
COL1A1P02452 AC006530.1-201ENST00000555980 571 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL1A1P02452 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.27□□□□□ -1.25
COL1A1P02452 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 AC008957.3-201ENST00000624112 2242 ntBASIC7.27□□□□□ -1.25
COL1A1P02452 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.27□□□□□ -1.25
COL1A1P02452 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.26□□□□□ -1.25
COL1A1P02452 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 HYDIN2-203ENST00000614586 13885 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.26□□□□□ -1.25
COL1A1P02452 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 SNRPEP6-201ENST00000407465 277 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.26□□□□□ -1.25
COL1A1P02452 AL445928.1-201ENST00000435545 222 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 RPL36AP39-201ENST00000445859 318 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 SDC4P-201ENST00000453285 601 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.26□□□□□ -1.25
COL1A1P02452 NENFP3-201ENST00000503735 313 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.26□□□□□ -1.25
COL1A1P02452 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 AC090651.1-201ENST00000567865 634 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.26□□□□□ -1.25
COL1A1P02452 AC104695.2-201ENST00000605056 775 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 AC022919.1-201ENST00000624979 626 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.26□□□□□ -1.25
COL1A1P02452 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
COL1A1P02452 SALL4P7-201ENST00000555779 3120 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.26□□□□□ -1.25
COL1A1P02452 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL1A1P02452 AC027279.4-201ENST00000624371 2072 ntBASIC7.26□□□□□ -1.25
COL1A1P02452 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.26□□□□□ -1.25
COL1A1P02452 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 AC104162.1-201ENST00000430831 2382 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.25□□□□□ -1.25
COL1A1P02452 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.25□□□□□ -1.25
COL1A1P02452 RPS12P17-201ENST00000438591 377 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 AL022319.1-201ENST00000458183 1167 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 AC008629.2-201ENST00000503783 483 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 CYCSP22-201ENST00000517555 339 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.25□□□□□ -1.25
COL1A1P02452 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.25□□□□□ -1.25
COL1A1P02452 SUMO2P15-201ENST00000604285 278 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 MIR6719-201ENST00000622428 87 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.25□□□□□ -1.25
COL1A1P02452 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.25□□□□□ -1.25
COL1A1P02452 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
COL1A1P02452 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 AL353763.1-201ENST00000624467 1628 ntBASIC7.25□□□□□ -1.25
COL1A1P02452 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL1A1P02452 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 417.4 ms