Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 OR6R1P-201ENST00000431838 940 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AL022324.2-201ENST00000434827 780 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AL645939.3-201ENST00000435408 225 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AL022237.1-201ENST00000446663 358 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.8□□□□□ -1.32
FOXN3O00409 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 AC015524.1-201ENST00000491585 472 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC114324.2-202ENST00000503812 134 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 MTND3P24-201ENST00000506306 329 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AC025768.1-201ENST00000510057 267 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.8□□□□□ -1.32
FOXN3O00409 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.8□□□□□ -1.32
FOXN3O00409 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 MTND4LP25-201ENST00000570218 163 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC026790.2-201ENST00000606282 430 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AL352984.2-201ENST00000611153 546 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 MIR6885-201ENST00000612241 66 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 AC068213.1-201ENST00000625124 226 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 CLUHP10-201ENST00000631979 980 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AC135068.11-201ENST00000636378 921 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC034229.2-201ENST00000566945 2508 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 SMG1P5-202ENST00000529428 4219 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 SMG1P2-201ENST00000566127 4221 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.8□□□□□ -1.32
FOXN3O00409 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
FOXN3O00409 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.79□□□□□ -1.32
FOXN3O00409 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 MIR421-201ENST00000365696 85 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.79□□□□□ -1.32
FOXN3O00409 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.79□□□□□ -1.32
FOXN3O00409 VIM2P-201ENST00000402383 1294 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AMZ2P2-201ENST00000406819 1057 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.79□□□□□ -1.32
FOXN3O00409 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 GTF3AP6-201ENST00000432585 986 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 PSMD8P1-201ENST00000436275 769 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 NPM1P23-201ENST00000440193 849 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 RPL31P20-201ENST00000449593 360 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AC103563.5-201ENST00000455643 364 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 RN7SL221P-201ENST00000466190 281 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 NPM1P21-201ENST00000513394 762 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.79□□□□□ -1.32
FOXN3O00409 RNA5SP418-201ENST00000515951 117 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.79□□□□□ -1.32
FOXN3O00409 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.79□□□□□ -1.32
FOXN3O00409 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.79□□□□□ -1.32
FOXN3O00409 AC008055.1-201ENST00000547032 609 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.79□□□□□ -1.32
FOXN3O00409 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.79□□□□□ -1.32
FOXN3O00409 MIR3189-201ENST00000578735 73 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AC016542.1-201ENST00000608259 493 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AC135803.1-201ENST00000608748 565 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 AC211486.4-201ENST00000621495 113 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.79□□□□□ -1.32
FOXN3O00409 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.79□□□□□ -1.32
FOXN3O00409 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.79□□□□□ -1.32
FOXN3O00409 AOX3P-204ENST00000491025 2107 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 AL359976.1-201ENST00000418655 3528 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FOXN3O00409 ZNF101P1-201ENST00000435701 1720 ntBASIC6.79□□□□□ -1.32
FOXN3O00409 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 AL442128.2-201ENST00000620246 1824 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC027279.4-201ENST00000624371 2072 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms