Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU4ATAC-201ENST00000580972 127 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC024267.2-201ENST00000582737 417 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC008555.7-201ENST00000605008 583 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC141002.1-201ENST00000607025 279 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 RN7SL261P-201ENST00000613441 282 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC007204.1-201ENST00000621794 555 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC087821.1-201ENST00000623639 567 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC016583.1-201ENST00000624221 2431 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SLC28A1O00337 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SLC28A1O00337 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 CASC19-246ENST00000641625 1606 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 AL121977.1-201ENST00000401636 979 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 PTCD2P2-201ENST00000415579 1095 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AC013268.2-201ENST00000420753 337 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 OSTCP4-201ENST00000424397 449 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AC128677.1-201ENST00000436016 442 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
SLC28A1O00337 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC122714.1-201ENST00000502510 459 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 RNU6-1334P-201ENST00000516032 105 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 TDGP1-201ENST00000543961 1229 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.9□□□□□ -1.46
SLC28A1O00337 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 U91328.4-201ENST00000608919 517 ntBASIC5.9□□□□□ -1.46
SLC28A1O00337 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.9□□□□□ -1.46
SLC28A1O00337 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.9□□□□□ -1.46
SLC28A1O00337 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SLC28A1O00337 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.9□□□□□ -1.47
SLC28A1O00337 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.9□□□□□ -1.47
SLC28A1O00337 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SLC28A1O00337 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.9□□□□□ -1.47
SLC28A1O00337 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.9□□□□□ -1.47
SLC28A1O00337 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SLC28A1O00337 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
SLC28A1O00337 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SLC28A1O00337 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
SLC28A1O00337 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SLC28A1O00337 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 AL133243.2-201ENST00000610331 1621 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC024587.1-201ENST00000505925 2157 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC011416.1-201ENST00000514947 1732 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SLC28A1O00337 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SLC28A1O00337 RNA5SP346-201ENST00000363541 121 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms