Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 OR7E91P-202ENST00000642062 1198 ntBASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 AC105235.1-201ENST00000623208 1816 ntBASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 AC079753.1-201ENST00000623243 3868 ntBASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NPIPA3F8WFD2 NEK2P2-201ENST00000438441 1338 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC011455.2-201ENST00000599320 3336 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 QRSL1P1-201ENST00000400977 1540 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AL731556.1-201ENST00000394628 3711 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 FUNDC2P3-201ENST00000334716 533 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 RPSAP65-201ENST00000429660 595 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC144530.1-201ENST00000452862 555 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 RN7SL369P-201ENST00000477138 299 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 RN7SL714P-201ENST00000487050 298 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 RN7SL104P-201ENST00000498686 293 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC025857.1-201ENST00000525252 377 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 MRPS21P8-201ENST00000569196 235 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC090616.1-201ENST00000583895 447 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AL138895.2-201ENST00000603019 178 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC091193.1-201ENST00000604640 448 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 CYCSP1-201ENST00000604815 315 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC079791.1-201ENST00000605356 973 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC018690.1-201ENST00000608144 626 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AC092681.3-201ENST00000609463 678 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AL136097.3-201ENST00000611097 505 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPIPA3F8WFD2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC137056.2-201ENST00000624055 1958 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SNX18P3-202ENST00000565670 1750 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC112492.2-201ENST00000432774 1030 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 RPL12P24-201ENST00000474907 486 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 OR2A3P-201ENST00000493774 953 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC095052.1-201ENST00000509955 863 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC022784.5-201ENST00000522241 437 ntBASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms