Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DRB4X5D2U9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 PCDHAC2-203ENST00000615316 3011 ntBASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 AC091874.3-201ENST00000512672 1195 ntBASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DRB4X5D2U9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 KRT16P6-202ENST00000425692 1426 ntBASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DRB4X5D2U9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 AC104771.1-201ENST00000603335 964 ntBASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DRB4X5D2U9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 LETM1P2-201ENST00000597330 2178 ntBASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DRB4X5D2U9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms