Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC008040.2-201ENST00000461049 708 ntBASIC33.11■■■□□ 2.89
BIVM-ERCC5R4GMW8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
BIVM-ERCC5R4GMW8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
BIVM-ERCC5R4GMW8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC33.1■■■□□ 2.89
BIVM-ERCC5R4GMW8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 AC007663.1-201ENST00000438948 1240 ntBASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 SLC25A1P4-201ENST00000567977 778 ntBASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 AC087388.1-201ENST00000571370 1112 ntBASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC33.09■■■□□ 2.89
BIVM-ERCC5R4GMW8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 AC091390.4-202ENST00000476426 537 ntBASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
BIVM-ERCC5R4GMW8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 YBX1P2-201ENST00000489612 999 ntBASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
BIVM-ERCC5R4GMW8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 ATP5G1P1-201ENST00000448724 379 ntBASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 AC010653.2-201ENST00000623505 997 ntBASIC33.06■■■□□ 2.88
BIVM-ERCC5R4GMW8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 KRT8P8-201ENST00000434750 1448 ntBASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC33.05■■■□□ 2.88
BIVM-ERCC5R4GMW8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
BIVM-ERCC5R4GMW8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
BIVM-ERCC5R4GMW8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms