Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 AC004854.2-201ENST00000608450 1441 ntBASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2D4Q9Y2X8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 AL031963.3-201ENST00000606441 850 ntBASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 AL139246.5-201ENST00000606645 996 ntBASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 KRT8P20-201ENST00000423953 1409 ntBASIC13.73□□□□□ -0.21
UBE2D4Q9Y2X8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2D4Q9Y2X8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms