Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RPH3AQ9Y2J0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 AC069544.1-201ENST00000609399 999 ntBASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPH3AQ9Y2J0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPH3AQ9Y2J0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 AL158047.1-201ENST00000445918 881 ntBASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 KRT16P6-202ENST00000425692 1426 ntBASIC18.06■□□□□ 0.48
RPH3AQ9Y2J0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPH3AQ9Y2J0 AC142381.4-202ENST00000563973 229 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms