Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.69■□□□□ 0.58
LHX6Q9UPM6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 CR769767.2-201ENST00000622735 460 ntBASIC18.69■□□□□ 0.58
LHX6Q9UPM6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.69■□□□□ 0.58
LHX6Q9UPM6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LHX6Q9UPM6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 RN7SL510P-201ENST00000581311 263 ntBASIC18.67■□□□□ 0.58
LHX6Q9UPM6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LHX6Q9UPM6 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
LHX6Q9UPM6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 HMGA1P5-201ENST00000412453 271 ntBASIC18.66■□□□□ 0.58
LHX6Q9UPM6 NIFKP9-201ENST00000419265 221 ntBASIC18.66■□□□□ 0.58
LHX6Q9UPM6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 AP005242.2-201ENST00000580065 1175 ntBASIC18.66■□□□□ 0.58
LHX6Q9UPM6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX6Q9UPM6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 COX11P1-201ENST00000489116 835 ntBASIC18.65■□□□□ 0.58
LHX6Q9UPM6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 AC116407.4-201ENST00000623319 1061 ntBASIC18.65■□□□□ 0.58
LHX6Q9UPM6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms