Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.91■□□□□ 0.94
CDH9Q9ULB4 KRT18P16-201ENST00000510337 1294 ntBASIC20.91■□□□□ 0.94
CDH9Q9ULB4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 AL391422.3-201ENST00000603791 2761 ntBASIC20.91■□□□□ 0.94
CDH9Q9ULB4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 AL049637.2-201ENST00000641778 930 ntBASIC20.91■□□□□ 0.94
CDH9Q9ULB4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH9Q9ULB4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 MIR4497-201ENST00000583208 89 ntBASIC20.9■□□□□ 0.94
CDH9Q9ULB4 AF186192.3-201ENST00000583427 947 ntBASIC20.9■□□□□ 0.94
CDH9Q9ULB4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH9Q9ULB4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH9Q9ULB4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 AC113410.3-201ENST00000623366 203 ntBASIC20.89■□□□□ 0.93
CDH9Q9ULB4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH9Q9ULB4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 TUBB8P6-201ENST00000436895 1288 ntBASIC20.88■□□□□ 0.93
CDH9Q9ULB4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms