Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.64■□□□□ 0.74
SPASTQ9UBP0 LINC01006-201ENST00000333319 2292 ntBASIC19.64■□□□□ 0.74
SPASTQ9UBP0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPASTQ9UBP0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 MIR4785-201ENST00000585005 73 ntBASIC19.64■□□□□ 0.73
SPASTQ9UBP0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SPASTQ9UBP0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 NBPF21P-201ENST00000425093 1451 ntBASIC19.63■□□□□ 0.73
SPASTQ9UBP0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 REXO1L12P-201ENST00000622156 912 ntBASIC19.63■□□□□ 0.73
SPASTQ9UBP0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.63■□□□□ 0.73
SPASTQ9UBP0 AC124283.5-201ENST00000624661 1809 ntBASIC19.62■□□□□ 0.73
SPASTQ9UBP0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 KRT16P5-201ENST00000455284 522 ntBASIC19.62■□□□□ 0.73
SPASTQ9UBP0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.62■□□□□ 0.73
SPASTQ9UBP0 AC113410.3-201ENST00000623366 203 ntBASIC19.62■□□□□ 0.73
SPASTQ9UBP0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPASTQ9UBP0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPASTQ9UBP0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms