Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 UBE2SP1-201ENST00000450587 669 ntBASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPHK1Q9NYA1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
SPHK1Q9NYA1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 AP006587.1-201ENST00000534129 1502 ntBASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPHK1Q9NYA1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.02■□□□□ 0.64
SPHK1Q9NYA1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SPHK1Q9NYA1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.02■□□□□ 0.63
SPHK1Q9NYA1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPHK1Q9NYA1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms