Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42SE1Q9NRR8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42SE1Q9NRR8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42SE1Q9NRR8 CROCCP3-202ENST00000420820 1947 ntBASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 AC018755.3-202ENST00000596210 929 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms