Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
POLE3Q9NRF9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.33■□□□□ 0.52
POLE3Q9NRF9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 GUSBP6-202ENST00000438529 1198 ntBASIC18.33■□□□□ 0.52
POLE3Q9NRF9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.33■□□□□ 0.52
POLE3Q9NRF9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 AC091874.3-201ENST00000512672 1195 ntBASIC18.32■□□□□ 0.52
POLE3Q9NRF9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.32■□□□□ 0.52
POLE3Q9NRF9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AC005829.2-201ENST00000571422 1056 ntBASIC18.31■□□□□ 0.52
POLE3Q9NRF9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AC125437.2-201ENST00000625180 2167 ntBASIC18.31■□□□□ 0.52
POLE3Q9NRF9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLE3Q9NRF9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.3■□□□□ 0.52
POLE3Q9NRF9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.3■□□□□ 0.52
POLE3Q9NRF9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms