Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 AC092667.1-201ENST00000434301 2586 ntBASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MKKSQ9NPJ1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
MKKSQ9NPJ1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.71■□□□□ 0.58
MKKSQ9NPJ1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 MIR718-201ENST00000390190 70 ntBASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 AC008550.1-201ENST00000511500 884 ntBASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 AIRN-201ENST00000601203 4374 ntBASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MKKSQ9NPJ1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 NBPF21P-201ENST00000425093 1451 ntBASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MKKSQ9NPJ1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 RPS2P4-201ENST00000476944 856 ntBASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
MKKSQ9NPJ1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms