Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 C1QBPP2-201ENST00000528754 825 ntBASIC20.69■□□□□ 0.9
CD248Q9HCU0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD248Q9HCU0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.69■□□□□ 0.9
CD248Q9HCU0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
CD248Q9HCU0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.68■□□□□ 0.9
CD248Q9HCU0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 POM121L13P-201ENST00000422362 380 ntBASIC20.68■□□□□ 0.9
CD248Q9HCU0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
CD248Q9HCU0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD248Q9HCU0 AC004408.2-201ENST00000623613 2777 ntBASIC20.68■□□□□ 0.9
CD248Q9HCU0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.67■□□□□ 0.9
CD248Q9HCU0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD248Q9HCU0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.66■□□□□ 0.9
CD248Q9HCU0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 AC073314.1-201ENST00000568729 2216 ntBASIC20.66■□□□□ 0.9
CD248Q9HCU0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD248Q9HCU0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 Z99916.2-201ENST00000604037 246 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms