Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 AC011298.2-201ENST00000617989 482 ntBASIC18.5■□□□□ 0.55
CHD8Q9HCK8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 AL035633.1-201ENST00000406139 838 ntBASIC18.49■□□□□ 0.55
CHD8Q9HCK8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 AC016734.2-201ENST00000624325 1377 ntBASIC18.49■□□□□ 0.55
CHD8Q9HCK8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
CHD8Q9HCK8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHD8Q9HCK8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 AP006587.1-201ENST00000534129 1502 ntBASIC18.48■□□□□ 0.55
CHD8Q9HCK8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 POLD2P1-201ENST00000511220 997 ntBASIC18.48■□□□□ 0.55
CHD8Q9HCK8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 AC112907.2-201ENST00000448639 330 ntBASIC18.48■□□□□ 0.55
CHD8Q9HCK8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD8Q9HCK8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 GCSHP2-201ENST00000560971 527 ntBASIC18.47■□□□□ 0.55
CHD8Q9HCK8 AC091304.2-201ENST00000564639 760 ntBASIC18.47■□□□□ 0.55
CHD8Q9HCK8 NEK4P2-201ENST00000580004 1012 ntBASIC18.47■□□□□ 0.55
CHD8Q9HCK8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD8Q9HCK8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AC005104.2-201ENST00000427818 678 ntBASIC18.46■□□□□ 0.55
CHD8Q9HCK8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 Z85996.1-201ENST00000494644 937 ntBASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms