Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE28Q9HCC9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 CLEC4GP1-201ENST00000596555 870 ntBASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 HLA-A-209ENST00000638375 975 ntBASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 AC018553.1-201ENST00000616682 1458 ntBASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFYVE28Q9HCC9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 AC005332.1-201ENST00000577698 1310 ntBASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE28Q9HCC9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 GUSBP5-202ENST00000510805 1989 ntBASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 AL359075.1-203ENST00000462729 1002 ntBASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 AL023803.3-201ENST00000615559 522 ntBASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 AC116407.4-201ENST00000623319 1061 ntBASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE28Q9HCC9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 AL691432.3-201ENST00000621860 400 ntBASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 KRT16P6-202ENST00000425692 1426 ntBASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE28Q9HCC9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 AL353719.1-201ENST00000566847 864 ntBASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 AC069148.1-201ENST00000608741 768 ntBASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 AC244015.2-201ENST00000616358 1861 ntBASIC22.62■■□□□ 1.21
ZFYVE28Q9HCC9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms