Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 MYC-209ENST00000641252 345 ntBASIC18.9■□□□□ 0.62
BRF2Q9HAW0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AC097658.1-201ENST00000475555 843 ntBASIC18.89■□□□□ 0.61
BRF2Q9HAW0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 HLA-B-256ENST00000639848 1089 ntBASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TFP1-202ENST00000475455 1573 ntBASIC18.87■□□□□ 0.61
BRF2Q9HAW0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC092666.2-201ENST00000613287 246 ntBASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC093484.2-201ENST00000580996 2166 ntBASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms