Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 MYC-209ENST00000641252 345 ntBASIC18.9■□□□□ 0.62
BRF2Q9HAW0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
BRF2Q9HAW0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AC097658.1-201ENST00000475555 843 ntBASIC18.89■□□□□ 0.61
BRF2Q9HAW0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF2Q9HAW0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 HLA-B-256ENST00000639848 1089 ntBASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF2Q9HAW0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TFP1-202ENST00000475455 1573 ntBASIC18.87■□□□□ 0.61
BRF2Q9HAW0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC092666.2-201ENST00000613287 246 ntBASIC18.87■□□□□ 0.61
BRF2Q9HAW0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF2Q9HAW0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 AC093484.2-201ENST00000580996 2166 ntBASIC18.86■□□□□ 0.61
BRF2Q9HAW0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF2Q9HAW0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms