Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 AC008687.6-201ENST00000596318 630 ntBASIC18.3■□□□□ 0.52
UBQLN3Q9H347 AC073648.6-201ENST00000641589 218 ntBASIC18.3■□□□□ 0.52
UBQLN3Q9H347 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
UBQLN3Q9H347 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 AC023632.3-201ENST00000521633 145 ntBASIC18.29■□□□□ 0.52
UBQLN3Q9H347 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 AC125437.2-201ENST00000625180 2167 ntBASIC18.29■□□□□ 0.52
UBQLN3Q9H347 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UBQLN3Q9H347 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.29■□□□□ 0.52
UBQLN3Q9H347 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 DPP3P2-201ENST00000416030 1696 ntBASIC18.28■□□□□ 0.52
UBQLN3Q9H347 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN3Q9H347 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.52
UBQLN3Q9H347 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 POM121L13P-201ENST00000422362 380 ntBASIC18.27■□□□□ 0.52
UBQLN3Q9H347 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 AC098590.1-201ENST00000468126 897 ntBASIC18.27■□□□□ 0.52
UBQLN3Q9H347 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN3Q9H347 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
UBQLN3Q9H347 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN3Q9H347 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
UBQLN3Q9H347 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN3Q9H347 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN3Q9H347 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN3Q9H347 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN3Q9H347 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms