Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF39Q9H2S5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 RN7SKP253-201ENST00000516424 309 ntBASIC21.77■■□□□ 1.08
RNF39Q9H2S5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 AC073508.3-201ENST00000619697 1419 ntBASIC21.77■■□□□ 1.08
RNF39Q9H2S5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RNF39Q9H2S5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
RNF39Q9H2S5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RNF39Q9H2S5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF39Q9H2S5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.07
RNF39Q9H2S5 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 AC110285.5-201ENST00000611501 352 ntBASIC21.76■■□□□ 1.07
RNF39Q9H2S5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF39Q9H2S5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.75■■□□□ 1.07
RNF39Q9H2S5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RNF39Q9H2S5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 MIR718-201ENST00000390190 70 ntBASIC21.74■■□□□ 1.07
RNF39Q9H2S5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 AC092685.1-201ENST00000447960 1243 ntBASIC21.74■■□□□ 1.07
RNF39Q9H2S5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 AC006927.2-201ENST00000639256 389 ntBASIC21.74■■□□□ 1.07
RNF39Q9H2S5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF39Q9H2S5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms