Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.84■□□□□ 0.77
VPS11Q9H270 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 AC009237.14-201ENST00000609975 1594 ntBASIC19.83■□□□□ 0.77
VPS11Q9H270 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS11Q9H270 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VPS11Q9H270 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS11Q9H270 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS11Q9H270 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS11Q9H270 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
VPS11Q9H270 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS11Q9H270 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS11Q9H270 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS11Q9H270 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS11Q9H270 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS11Q9H270 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS11Q9H270 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.83■□□□□ 0.76
VPS11Q9H270 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.83■□□□□ 0.76
VPS11Q9H270 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VPS11Q9H270 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS11Q9H270 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
VPS11Q9H270 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS11Q9H270 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS11Q9H270 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS11Q9H270 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS11Q9H270 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS11Q9H270 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VPS11Q9H270 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS11Q9H270 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS11Q9H270 AC013268.1-206ENST00000638368 961 ntBASIC19.82■□□□□ 0.76
VPS11Q9H270 AC112229.1-201ENST00000639295 961 ntBASIC19.82■□□□□ 0.76
VPS11Q9H270 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS11Q9H270 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VPS11Q9H270 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS11Q9H270 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
VPS11Q9H270 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS11Q9H270 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
VPS11Q9H270 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS11Q9H270 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS11Q9H270 AC034268.1-201ENST00000441047 882 ntBASIC19.81■□□□□ 0.76
VPS11Q9H270 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
VPS11Q9H270 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.81■□□□□ 0.76
VPS11Q9H270 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS11Q9H270 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS11Q9H270 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
VPS11Q9H270 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
VPS11Q9H270 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 PTBP1P-201ENST00000554374 1601 ntBASIC19.8■□□□□ 0.76
VPS11Q9H270 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS11Q9H270 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
VPS11Q9H270 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VPS11Q9H270 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS11Q9H270 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.8■□□□□ 0.76
VPS11Q9H270 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.8■□□□□ 0.76
VPS11Q9H270 AL162412.1-201ENST00000567129 965 ntBASIC19.8■□□□□ 0.76
VPS11Q9H270 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.8■□□□□ 0.76
VPS11Q9H270 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS11Q9H270 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS11Q9H270 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms