Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDH23Q9H251 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDH23Q9H251 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDH23Q9H251 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 AC004980.1-204ENST00000429707 299 ntBASIC21.12■□□□□ 0.97
CDH23Q9H251 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH23Q9H251 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 CCR12P-201ENST00000446203 998 ntBASIC21.12■□□□□ 0.97
CDH23Q9H251 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDH23Q9H251 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH23Q9H251 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CDH23Q9H251 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDH23Q9H251 AC008040.2-201ENST00000461049 708 ntBASIC21.11■□□□□ 0.97
CDH23Q9H251 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH23Q9H251 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CDH23Q9H251 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 ATP5G2P1-201ENST00000433580 426 ntBASIC21.11■□□□□ 0.97
CDH23Q9H251 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH23Q9H251 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH23Q9H251 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH23Q9H251 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 NPAP1P7-201ENST00000613027 823 ntBASIC21.11■□□□□ 0.97
CDH23Q9H251 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH23Q9H251 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH23Q9H251 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH23Q9H251 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CDH23Q9H251 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 MFAP1P1-201ENST00000442257 1255 ntBASIC21.1■□□□□ 0.97
CDH23Q9H251 YBX1P10-201ENST00000444752 975 ntBASIC21.1■□□□□ 0.97
CDH23Q9H251 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH23Q9H251 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDH23Q9H251 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH23Q9H251 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH23Q9H251 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDH23Q9H251 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH23Q9H251 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH23Q9H251 AL441883.1-201ENST00000566170 1045 ntBASIC21.1■□□□□ 0.97
CDH23Q9H251 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.1■□□□□ 0.97
CDH23Q9H251 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH23Q9H251 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH23Q9H251 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH23Q9H251 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 RCC2P6-201ENST00000526625 1557 ntBASIC21.09■□□□□ 0.97
CDH23Q9H251 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH23Q9H251 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CDH23Q9H251 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH23Q9H251 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH23Q9H251 AC111152.3-201ENST00000569699 673 ntBASIC21.09■□□□□ 0.97
CDH23Q9H251 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH23Q9H251 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH23Q9H251 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH23Q9H251 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH23Q9H251 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.08■□□□□ 0.97
CDH23Q9H251 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH23Q9H251 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH23Q9H251 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH23Q9H251 AC005229.4-201ENST00000610085 2198 ntBASIC21.08■□□□□ 0.96
CDH23Q9H251 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CDH23Q9H251 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.08■□□□□ 0.96
CDH23Q9H251 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH23Q9H251 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH23Q9H251 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.08■□□□□ 0.96
CDH23Q9H251 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.08■□□□□ 0.96
CDH23Q9H251 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH23Q9H251 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms