Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.2■□□□□ 0.82
COL25A1Q9BXS0 AP003041.3-201ENST00000527151 707 ntBASIC20.2■□□□□ 0.82
COL25A1Q9BXS0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.2■□□□□ 0.82
COL25A1Q9BXS0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL25A1Q9BXS0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL25A1Q9BXS0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 KRT8P26-201ENST00000534154 1276 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 NEK4P2-201ENST00000580004 1012 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AL773604.1-201ENST00000617417 272 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AC083906.6-201ENST00000641366 219 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AC079781.4-201ENST00000641908 219 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 AC142381.3-201ENST00000568208 1670 ntBASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL25A1Q9BXS0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 AC092597.1-201ENST00000487352 616 ntBASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
COL25A1Q9BXS0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL25A1Q9BXS0 AKR1C7P-201ENST00000305623 895 ntBASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 AC010327.4-202ENST00000591484 748 ntBASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL25A1Q9BXS0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 AC068473.5-201ENST00000616428 2072 ntBASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 DRAXINP1-201ENST00000437611 948 ntBASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 COX20P2-201ENST00000452636 358 ntBASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.15■□□□□ 0.82
COL25A1Q9BXS0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms