Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC233263.1-201ENST00000578059 224 ntBASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 TFP1-202ENST00000475455 1573 ntBASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 AC009237.14-201ENST00000609975 1594 ntBASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2Q9BSQ5 TMEM179-206ENST00000616017 1645 ntBASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 PRKY-204ENST00000533551 1019 ntBASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 RN7SL471P-201ENST00000580476 299 ntBASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 MTDHP1-201ENST00000605323 784 ntBASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2Q9BSQ5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCM2Q9BSQ5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 PRORSD1P-201ENST00000295112 541 ntBASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms