Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 AC098590.1-201ENST00000468126 897 ntBASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 RPS2P52-201ENST00000469610 820 ntBASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.52■□□□□ 0.24
PCGF1Q9BSM1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 AC092720.2-201ENST00000602388 1665 ntBASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.52■□□□□ 0.23
PCGF1Q9BSM1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 POM121L13P-201ENST00000422362 380 ntBASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 GCSHP5-201ENST00000443090 522 ntBASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 C1QBPP2-201ENST00000528754 825 ntBASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 FAM197Y4-202ENST00000622692 608 ntBASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCGF1Q9BSM1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 AC069544.1-201ENST00000609399 999 ntBASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCGF1Q9BSM1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms