Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC28.52■■■□□ 2.16
SCAF11Q99590 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.52■■■□□ 2.16
SCAF11Q99590 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC28.52■■■□□ 2.16
SCAF11Q99590 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF11Q99590 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
SCAF11Q99590 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC28.51■■■□□ 2.16
SCAF11Q99590 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
SCAF11Q99590 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC28.51■■■□□ 2.16
SCAF11Q99590 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SCAF11Q99590 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC28.51■■■□□ 2.15
SCAF11Q99590 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
SCAF11Q99590 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SCAF11Q99590 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC28.51■■■□□ 2.15
SCAF11Q99590 FDX2-206ENST00000492239 773 ntTSL 2 BASIC28.51■■■□□ 2.15
SCAF11Q99590 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC28.51■■■□□ 2.15
SCAF11Q99590 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC28.5■■■□□ 2.15
SCAF11Q99590 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC28.5■■■□□ 2.15
SCAF11Q99590 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC28.5■■■□□ 2.15
SCAF11Q99590 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SCAF11Q99590 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SCAF11Q99590 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SCAF11Q99590 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC28.5■■■□□ 2.15
SCAF11Q99590 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC28.49■■■□□ 2.15
SCAF11Q99590 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.49■■■□□ 2.15
SCAF11Q99590 HLA-G-202ENST00000376815 851 ntBASIC28.49■■■□□ 2.15
SCAF11Q99590 HLA-G-203ENST00000376818 1127 ntBASIC28.49■■■□□ 2.15
SCAF11Q99590 CALM3-202ENST00000391918 702 ntTSL 2 BASIC28.49■■■□□ 2.15
SCAF11Q99590 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
SCAF11Q99590 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC28.49■■■□□ 2.15
SCAF11Q99590 AL121956.5-201ENST00000625261 221 ntBASIC28.49■■■□□ 2.15
SCAF11Q99590 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC28.49■■■□□ 2.15
SCAF11Q99590 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SCAF11Q99590 AL121603.2-201ENST00000557373 2117 ntBASIC28.49■■■□□ 2.15
SCAF11Q99590 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC28.49■■■□□ 2.15
SCAF11Q99590 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
SCAF11Q99590 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
SCAF11Q99590 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC28.48■■■□□ 2.15
SCAF11Q99590 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SCAF11Q99590 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
SCAF11Q99590 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SCAF11Q99590 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SCAF11Q99590 AL450487.1-201ENST00000426799 995 ntBASIC28.47■■■□□ 2.15
SCAF11Q99590 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SCAF11Q99590 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC28.47■■■□□ 2.15
SCAF11Q99590 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SCAF11Q99590 FAM86EP-206ENST00000510506 987 ntBASIC28.46■■■□□ 2.15
SCAF11Q99590 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC28.46■■■□□ 2.15
SCAF11Q99590 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC28.46■■■□□ 2.15
SCAF11Q99590 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC28.46■■■□□ 2.15
SCAF11Q99590 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC28.46■■■□□ 2.15
SCAF11Q99590 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 IPPK-202ENST00000375522 882 ntTSL 3 BASIC28.46■■■□□ 2.15
SCAF11Q99590 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.15
SCAF11Q99590 AC026396.1-201ENST00000419388 421 ntBASIC28.46■■■□□ 2.15
SCAF11Q99590 PCED1CP-201ENST00000419887 785 ntBASIC28.46■■■□□ 2.15
SCAF11Q99590 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
SCAF11Q99590 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC28.46■■■□□ 2.15
SCAF11Q99590 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC28.46■■■□□ 2.15
SCAF11Q99590 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SCAF11Q99590 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.45■■■□□ 2.14
SCAF11Q99590 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC28.45■■■□□ 2.14
SCAF11Q99590 CD320-202ENST00000537716 1119 ntTSL 2 BASIC28.45■■■□□ 2.14
SCAF11Q99590 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SCAF11Q99590 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC28.45■■■□□ 2.14
SCAF11Q99590 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC28.45■■■□□ 2.14
SCAF11Q99590 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SCAF11Q99590 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
SCAF11Q99590 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
SCAF11Q99590 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SCAF11Q99590 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC28.44■■■□□ 2.14
SCAF11Q99590 BET1L-202ENST00000332865 533 ntTSL 5 BASIC28.44■■■□□ 2.14
SCAF11Q99590 AC092647.4-201ENST00000457211 535 ntBASIC28.44■■■□□ 2.14
SCAF11Q99590 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC28.44■■■□□ 2.14
SCAF11Q99590 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
SCAF11Q99590 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC28.44■■■□□ 2.14
SCAF11Q99590 AC006128.1-201ENST00000624704 1661 ntBASIC28.44■■■□□ 2.14
SCAF11Q99590 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
SCAF11Q99590 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.43■■■□□ 2.14
SCAF11Q99590 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms