Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 AC233263.1-201ENST00000578059 224 ntBASIC20.46■□□□□ 0.87
HAPLN3Q96S86 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HAPLN3Q96S86 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 ABHD17AP1-201ENST00000358206 933 ntBASIC20.45■□□□□ 0.86
HAPLN3Q96S86 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HAPLN3Q96S86 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 PRKY-204ENST00000533551 1019 ntBASIC20.44■□□□□ 0.86
HAPLN3Q96S86 RN7SL471P-201ENST00000580476 299 ntBASIC20.44■□□□□ 0.86
HAPLN3Q96S86 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.44■□□□□ 0.86
HAPLN3Q96S86 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 KRT18P29-201ENST00000397031 1267 ntBASIC20.43■□□□□ 0.86
HAPLN3Q96S86 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.43■□□□□ 0.86
HAPLN3Q96S86 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HAPLN3Q96S86 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms