Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 AC091799.1-201ENST00000422823 811 ntBASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 AC133561.5-201ENST00000635547 218 ntBASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 KRT17P2-201ENST00000300992 1314 ntBASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 TCF3P1-201ENST00000423021 1937 ntBASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRIP1Q96KN7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 MCRIP2P1-201ENST00000394346 511 ntBASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRIP1Q96KN7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRIP1Q96KN7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 RPS2P55-201ENST00000397318 883 ntBASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 AC012618.2-201ENST00000428058 849 ntBASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 AC107956.1-201ENST00000494359 873 ntBASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 AC233702.5-201ENST00000584107 538 ntBASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RPGRIP1Q96KN7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 KRT18P68-201ENST00000392293 1000 ntBASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRIP1Q96KN7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms