Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 UPK3BP1-201ENST00000428678 509 ntBASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 AC091076.1-201ENST00000610741 619 ntBASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 AL358472.4-201ENST00000633140 710 ntBASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 PKD1P6-201ENST00000343738 4769 ntBASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 AC116351.2-201ENST00000606540 1585 ntBASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 YBX1P10-201ENST00000444752 975 ntBASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNRNP40Q96DI7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 TFP1-202ENST00000475455 1573 ntBASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 FBXW4P1-201ENST00000426721 2239 ntBASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 KRT18P16-201ENST00000510337 1294 ntBASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 AC130371.2-201ENST00000619443 611 ntBASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNRNP40Q96DI7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 HMGA1P5-201ENST00000412453 271 ntBASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 AC117947.1-201ENST00000427448 529 ntBASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 AP000692.2-201ENST00000608391 879 ntBASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms