Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 AC006333.2-201ENST00000607957 2099 ntBASIC16.89■□□□□ 0.29
SMIM4Q8WVI0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 AP001271.2-201ENST00000624018 1556 ntBASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 AC090164.3-201ENST00000610780 2143 ntBASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMIM4Q8WVI0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 AC138907.5-202ENST00000569484 235 ntBASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.87■□□□□ 0.29
SMIM4Q8WVI0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 AC007322.3-201ENST00000426526 701 ntBASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SMIM4Q8WVI0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 AL133373.2-201ENST00000623187 2828 ntBASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMIM4Q8WVI0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms