Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDND2Q8NHS1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 KRASP1-201ENST00000407852 552 ntBASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 AC133681.1-201ENST00000465482 601 ntBASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDND2Q8NHS1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 AC023632.3-201ENST00000521633 145 ntBASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 MIR4497-201ENST00000583208 89 ntBASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDND2Q8NHS1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDND2Q8NHS1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 SNORA78-201ENST00000459373 127 ntBASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 AC110285.5-201ENST00000611501 352 ntBASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 PCDHAC2-203ENST00000615316 3011 ntBASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDND2Q8NHS1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms