Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PAF1Q8N7H5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PAF1Q8N7H5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 AC020907.5-201ENST00000624372 1936 ntBASIC20.26■□□□□ 0.83
PAF1Q8N7H5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 ESRRAP1-201ENST00000400596 1257 ntBASIC20.26■□□□□ 0.83
PAF1Q8N7H5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 AC073314.1-201ENST00000568729 2216 ntBASIC20.26■□□□□ 0.83
PAF1Q8N7H5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PAF1Q8N7H5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 UNC93B5-201ENST00000530315 699 ntBASIC20.25■□□□□ 0.83
PAF1Q8N7H5 AP003097.1-201ENST00000530657 1135 ntBASIC20.25■□□□□ 0.83
PAF1Q8N7H5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAF1Q8N7H5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 OR6D1P-202ENST00000641007 5290 ntBASIC20.24■□□□□ 0.83
PAF1Q8N7H5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PAF1Q8N7H5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.23■□□□□ 0.83
PAF1Q8N7H5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.23■□□□□ 0.83
PAF1Q8N7H5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 AC023632.3-201ENST00000521633 145 ntBASIC20.23■□□□□ 0.83
PAF1Q8N7H5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 AC005829.2-201ENST00000571422 1056 ntBASIC20.23■□□□□ 0.83
PAF1Q8N7H5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 AL031963.3-201ENST00000606441 850 ntBASIC20.23■□□□□ 0.83
PAF1Q8N7H5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms