Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 AC110285.5-201ENST00000611501 352 ntBASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 AC112907.3-201ENST00000577781 2400 ntBASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 TMEM179-206ENST00000616017 1645 ntBASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAM1L1Q8N609 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 FAM197Y4-202ENST00000622692 608 ntBASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAM1L1Q8N609 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 YBX1P10-201ENST00000444752 975 ntBASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 AL158047.1-201ENST00000445918 881 ntBASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAM1L1Q8N609 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAM1L1Q8N609 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 AC004264.1-201ENST00000608354 794 ntBASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAM1L1Q8N609 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms