Protein–RNA interactions for Protein: Q8N123

CPXCR1, CPX chromosomal region candidate gene 1 protein, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXCR1Q8N123 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 MIR1238-201ENST00000408483 83 ntBASIC22.72■■□□□ 1.23
CPXCR1Q8N123 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CPXCR1Q8N123 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 AL390955.1-201ENST00000428694 934 ntBASIC22.71■■□□□ 1.23
CPXCR1Q8N123 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 C1QL1P1-201ENST00000568105 661 ntBASIC22.71■■□□□ 1.23
CPXCR1Q8N123 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPXCR1Q8N123 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
CPXCR1Q8N123 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CPXCR1Q8N123 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 YBX1P10-201ENST00000444752 975 ntBASIC22.7■■□□□ 1.22
CPXCR1Q8N123 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPXCR1Q8N123 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 RCN1P1-201ENST00000400413 996 ntBASIC22.69■■□□□ 1.22
CPXCR1Q8N123 AC116562.2-201ENST00000507042 360 ntBASIC22.69■■□□□ 1.22
CPXCR1Q8N123 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 AC010331.1-201ENST00000611423 582 ntBASIC22.69■■□□□ 1.22
CPXCR1Q8N123 MIR6786-201ENST00000616843 113 ntBASIC22.69■■□□□ 1.22
CPXCR1Q8N123 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPXCR1Q8N123 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.68■■□□□ 1.22
CPXCR1Q8N123 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 TUBB8P6-201ENST00000436895 1288 ntBASIC22.68■■□□□ 1.22
CPXCR1Q8N123 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPXCR1Q8N123 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 KRT18P16-201ENST00000510337 1294 ntBASIC22.67■■□□□ 1.22
CPXCR1Q8N123 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CPXCR1Q8N123 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms