Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 AC087388.1-201ENST00000571370 1112 ntBASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 AP000692.2-201ENST00000608391 879 ntBASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 AC011298.2-201ENST00000617989 482 ntBASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL27A1Q8IZC6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 TMEM179-206ENST00000616017 1645 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 FAM207BP-201ENST00000447172 505 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 AC091390.4-202ENST00000476426 537 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 AL358472.4-201ENST00000633140 710 ntBASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.71■□□□□ 0.59
COL27A1Q8IZC6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.71■□□□□ 0.58
COL27A1Q8IZC6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 AC008040.2-201ENST00000461049 708 ntBASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 BX119927.1-201ENST00000636596 1552 ntBASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
COL27A1Q8IZC6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.69■□□□□ 0.58
COL27A1Q8IZC6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 AL359075.1-203ENST00000462729 1002 ntBASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms