Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.12
TRIM50Q86XT4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.08■■□□□ 1.12
TRIM50Q86XT4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 NIFKP9-201ENST00000419265 221 ntBASIC22.07■■□□□ 1.12
TRIM50Q86XT4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 NUDT16P1-203ENST00000513809 620 ntBASIC22.07■■□□□ 1.12
TRIM50Q86XT4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 REXO1L10P-201ENST00000615707 1290 ntBASIC22.07■■□□□ 1.12
TRIM50Q86XT4 CR392000.1-201ENST00000624770 1228 ntBASIC22.07■■□□□ 1.12
TRIM50Q86XT4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM50Q86XT4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM50Q86XT4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 RBM17P1-201ENST00000453646 1190 ntBASIC22.05■■□□□ 1.12
TRIM50Q86XT4 KRT18P21-201ENST00000515767 1272 ntBASIC22.05■■□□□ 1.12
TRIM50Q86XT4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM50Q86XT4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 AC079598.2-202ENST00000546624 1451 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 FAM210CP-201ENST00000445714 574 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 C1QL1P1-201ENST00000568105 661 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 AP000525.1-201ENST00000608286 694 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 PHGDH-210ENST00000641115 1638 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 KRT8P9-201ENST00000558927 1449 ntBASIC22.04■■□□□ 1.12
TRIM50Q86XT4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM50Q86XT4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 AC012306.2-201ENST00000609350 630 ntBASIC22.03■■□□□ 1.12
TRIM50Q86XT4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 AC073314.1-201ENST00000568729 2216 ntBASIC22.03■■□□□ 1.12
TRIM50Q86XT4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.03■■□□□ 1.12
TRIM50Q86XT4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM50Q86XT4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM50Q86XT4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM50Q86XT4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms