Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.14■□□□□ 0.5
PTCHD4Q6ZW05 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 FAM21FP-204ENST00000608637 956 ntBASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.14■□□□□ 0.49
PTCHD4Q6ZW05 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 AC093503.3-201ENST00000624917 2352 ntBASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCHD4Q6ZW05 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC090340.1-201ENST00000620778 4980 ntBASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC097381.1-201ENST00000429019 1296 ntBASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC034268.1-201ENST00000441047 882 ntBASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 CDV3P1-201ENST00000471403 739 ntBASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCHD4Q6ZW05 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms