Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC30.26■■■□□ 2.43
CD109Q6YHK3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC30.26■■■□□ 2.43
CD109Q6YHK3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CD109Q6YHK3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC30.25■■■□□ 2.43
CD109Q6YHK3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.25■■■□□ 2.43
CD109Q6YHK3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC30.25■■■□□ 2.43
CD109Q6YHK3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC30.25■■■□□ 2.43
CD109Q6YHK3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.25■■■□□ 2.43
CD109Q6YHK3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD109Q6YHK3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
CD109Q6YHK3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CD109Q6YHK3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CD109Q6YHK3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CD109Q6YHK3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CD109Q6YHK3 GPALPP1-207ENST00000611650 899 ntBASIC30.23■■■□□ 2.43
CD109Q6YHK3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.23■■■□□ 2.43
CD109Q6YHK3 CR769767.2-201ENST00000622735 460 ntBASIC30.23■■■□□ 2.43
CD109Q6YHK3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.23■■■□□ 2.43
CD109Q6YHK3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.23■■■□□ 2.43
CD109Q6YHK3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CD109Q6YHK3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CD109Q6YHK3 AC018553.1-201ENST00000616682 1458 ntBASIC30.23■■■□□ 2.43
CD109Q6YHK3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 CA15P1-201ENST00000481698 905 ntBASIC30.22■■■□□ 2.43
CD109Q6YHK3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CD109Q6YHK3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
CD109Q6YHK3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CD109Q6YHK3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC30.22■■■□□ 2.43
CD109Q6YHK3 KRT17P6-201ENST00000453795 1220 ntBASIC30.22■■■□□ 2.43
CD109Q6YHK3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CD109Q6YHK3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD109Q6YHK3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD109Q6YHK3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD109Q6YHK3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 AC006538.3-201ENST00000612495 578 ntBASIC30.21■■■□□ 2.43
CD109Q6YHK3 AC004263.2-201ENST00000617183 678 ntBASIC30.21■■■□□ 2.43
CD109Q6YHK3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD109Q6YHK3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.21■■■□□ 2.43
CD109Q6YHK3 KRT8P10-201ENST00000450021 1447 ntBASIC30.2■■■□□ 2.43
CD109Q6YHK3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CD109Q6YHK3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.2■■■□□ 2.43
CD109Q6YHK3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.43
CD109Q6YHK3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CD109Q6YHK3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC30.2■■■□□ 2.42
CD109Q6YHK3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
CD109Q6YHK3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC30.2■■■□□ 2.42
CD109Q6YHK3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
CD109Q6YHK3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.2■■■□□ 2.42
CD109Q6YHK3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30.2■■■□□ 2.42
CD109Q6YHK3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CD109Q6YHK3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms