Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AL355075.4-201ENST00000554988 638 ntBASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 AP003071.4-201ENST00000562276 1284 ntBASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 AP001271.2-201ENST00000624018 1556 ntBASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 CLDN5-201ENST00000403084 2357 ntBASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC27A1Q6PCB7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC27A1Q6PCB7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC27A1Q6PCB7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 TSPY15P-201ENST00000457163 923 ntBASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 NUDT16P1-203ENST00000513809 620 ntBASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 CR392000.1-201ENST00000624770 1228 ntBASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC27A1Q6PCB7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC27A1Q6PCB7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC27A1Q6PCB7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC27A1Q6PCB7 KRT16P1-201ENST00000399124 1418 ntBASIC21.39■■□□□ 1.02
SLC27A1Q6PCB7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 REXO1L12P-201ENST00000622156 912 ntBASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SLC27A1Q6PCB7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 TMEM179-206ENST00000616017 1645 ntBASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 AC092667.1-201ENST00000434301 2586 ntBASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC27A1Q6PCB7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms