Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 PTBP1P-201ENST00000554374 1601 ntBASIC20.71■□□□□ 0.91
RNF43Q68DV7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 SMG8-203ENST00000578922 2178 ntBASIC20.71■□□□□ 0.91
RNF43Q68DV7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 AC069544.1-201ENST00000609399 999 ntBASIC20.71■□□□□ 0.91
RNF43Q68DV7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF43Q68DV7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RNF43Q68DV7 AC020907.5-201ENST00000624372 1936 ntBASIC20.7■□□□□ 0.91
RNF43Q68DV7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 AC233263.1-201ENST00000578059 224 ntBASIC20.7■□□□□ 0.9
RNF43Q68DV7 AC120498.8-201ENST00000614275 531 ntBASIC20.7■□□□□ 0.9
RNF43Q68DV7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF43Q68DV7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF43Q68DV7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 KRT18P21-201ENST00000515767 1272 ntBASIC20.69■□□□□ 0.9
RNF43Q68DV7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF43Q68DV7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF43Q68DV7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 KRT17P3-201ENST00000420566 1262 ntBASIC20.68■□□□□ 0.9
RNF43Q68DV7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 RN7SL471P-201ENST00000580476 299 ntBASIC20.68■□□□□ 0.9
RNF43Q68DV7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 Z99916.2-201ENST00000604037 246 ntBASIC20.68■□□□□ 0.9
RNF43Q68DV7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF43Q68DV7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF43Q68DV7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF43Q68DV7 BX323043.1-201ENST00000641006 1765 ntBASIC20.67■□□□□ 0.9
RNF43Q68DV7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF43Q68DV7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms