Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 CYMP-203ENST00000474680 1263 ntBASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 AC092597.1-201ENST00000487352 616 ntBASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 AKR1C7P-201ENST00000305623 895 ntBASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 CHCHD2P8-201ENST00000429873 447 ntBASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 TP73-AS1-207ENST00000624167 988 ntBASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL13A1Q5TAT6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 RPL13AP23-201ENST00000480739 586 ntBASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 KRT8P26-201ENST00000534154 1276 ntBASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL13A1Q5TAT6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 AC137767.1-201ENST00000602918 1920 ntBASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 AC004967.1-201ENST00000453589 447 ntBASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 AP003041.3-201ENST00000527151 707 ntBASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.41■■□□□ 1.18
COL13A1Q5TAT6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.4■■□□□ 1.18
COL13A1Q5TAT6 AC243591.1-201ENST00000452967 1364 ntBASIC22.39■■□□□ 1.18
COL13A1Q5TAT6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL13A1Q5TAT6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL13A1Q5TAT6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AL031284.1-201ENST00000419297 478 ntBASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 GPX1P2-201ENST00000429271 606 ntBASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AC138894.3-201ENST00000603787 634 ntBASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL13A1Q5TAT6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms