Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC011484.1-201ENST00000377652 1995 ntBASIC17.24■□□□□ 0.35
LRRK2Q5S007 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 AC011298.2-201ENST00000617989 482 ntBASIC17.24■□□□□ 0.35
LRRK2Q5S007 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 FAM220CP-201ENST00000395253 831 ntBASIC17.24■□□□□ 0.35
LRRK2Q5S007 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRK2Q5S007 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRK2Q5S007 KRT8P36-201ENST00000489121 1440 ntBASIC17.24■□□□□ 0.35
LRRK2Q5S007 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AC004980.1-204ENST00000429707 299 ntBASIC17.23■□□□□ 0.35
LRRK2Q5S007 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRK2Q5S007 AC022898.2-201ENST00000616822 1312 ntBASIC17.23■□□□□ 0.35
LRRK2Q5S007 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 LINC02084-201ENST00000606069 1096 ntBASIC17.22■□□□□ 0.35
LRRK2Q5S007 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 NEK4P2-201ENST00000580004 1012 ntBASIC17.22■□□□□ 0.35
LRRK2Q5S007 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRK2Q5S007 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRK2Q5S007 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRK2Q5S007 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRK2Q5S007 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRK2Q5S007 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRK2Q5S007 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRK2Q5S007 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.21■□□□□ 0.35
LRRK2Q5S007 AC131212.4-201ENST00000623606 975 ntBASIC17.21■□□□□ 0.35
LRRK2Q5S007 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 STARP1-201ENST00000397973 869 ntBASIC17.2■□□□□ 0.34
LRRK2Q5S007 SPDYE13P-201ENST00000445314 798 ntBASIC17.2■□□□□ 0.34
LRRK2Q5S007 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 BX640515.1-201ENST00000617215 977 ntBASIC17.2■□□□□ 0.34
LRRK2Q5S007 AL031008.1-201ENST00000619963 541 ntBASIC17.2■□□□□ 0.34
LRRK2Q5S007 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRK2Q5S007 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRK2Q5S007 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms