Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 PHGDH-210ENST00000641115 1638 ntBASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.83■□□□□ 0.45
RNFT1Q5M7Z0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 MIR1238-201ENST00000408483 83 ntBASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 YBX1P10-201ENST00000444752 975 ntBASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 KRT18P16-201ENST00000510337 1294 ntBASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNFT1Q5M7Z0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 AC010331.1-201ENST00000611423 582 ntBASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNFT1Q5M7Z0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 MESTP1-201ENST00000404287 994 ntBASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 MIR6786-201ENST00000616843 113 ntBASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNFT1Q5M7Z0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 AL445675.2-201ENST00000620291 557 ntBASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNFT1Q5M7Z0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 TUBB8P6-201ENST00000436895 1288 ntBASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 FITM1-202ENST00000559294 800 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms