Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 TFP1-202ENST00000475455 1573 ntBASIC17.42■□□□□ 0.38
FREM1Q5H8C1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM1Q5H8C1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM1Q5H8C1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 Z99916.2-201ENST00000604037 246 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AP001271.2-201ENST00000624018 1556 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AL596275.1-201ENST00000423464 877 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 AFG3L1P-217ENST00000557444 2447 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 KRT16P6-202ENST00000425692 1426 ntBASIC17.4■□□□□ 0.38
FREM1Q5H8C1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.4■□□□□ 0.38
FREM1Q5H8C1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FREM1Q5H8C1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
FREM1Q5H8C1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FREM1Q5H8C1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 HLA-G-202ENST00000376815 851 ntBASIC17.39■□□□□ 0.37
FREM1Q5H8C1 HLA-G-203ENST00000376818 1127 ntBASIC17.39■□□□□ 0.37
FREM1Q5H8C1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 AC116351.2-201ENST00000606540 1585 ntBASIC17.39■□□□□ 0.37
FREM1Q5H8C1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 AP006294.2-201ENST00000641667 209 ntBASIC17.39■□□□□ 0.37
FREM1Q5H8C1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
FREM1Q5H8C1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FREM1Q5H8C1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms