Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 AL390719.1-204ENST00000412397 1219 ntBASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.93■□□□□ 0.46
RASGEF1BQ0VAM2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 AC023632.3-201ENST00000521633 145 ntBASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.92■□□□□ 0.46
RASGEF1BQ0VAM2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 UNC93B5-201ENST00000530315 699 ntBASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 AC005829.2-201ENST00000571422 1056 ntBASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RASGEF1BQ0VAM2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 HLA-G-202ENST00000376815 851 ntBASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 HLA-G-203ENST00000376818 1127 ntBASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 TCF3P1-201ENST00000423021 1937 ntBASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.9■□□□□ 0.46
RASGEF1BQ0VAM2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RASGEF1BQ0VAM2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RASGEF1BQ0VAM2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RASGEF1BQ0VAM2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.89■□□□□ 0.46
RASGEF1BQ0VAM2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RASGEF1BQ0VAM2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RASGEF1BQ0VAM2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.89■□□□□ 0.45
RASGEF1BQ0VAM2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms