Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-1P78426 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 AC239809.2-201ENST00000415381 517 ntBASIC17.37■□□□□ 0.37
NKX6-1P78426 AC087499.1-201ENST00000418141 1075 ntBASIC17.37■□□□□ 0.37
NKX6-1P78426 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 MTDHP1-201ENST00000605323 784 ntBASIC17.37■□□□□ 0.37
NKX6-1P78426 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX6-1P78426 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-1P78426 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NKX6-1P78426 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NKX6-1P78426 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX6-1P78426 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NKX6-1P78426 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NKX6-1P78426 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX6-1P78426 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.36■□□□□ 0.37
NKX6-1P78426 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.36■□□□□ 0.37
NKX6-1P78426 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.36■□□□□ 0.37
NKX6-1P78426 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX6-1P78426 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX6-1P78426 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 AC005829.2-201ENST00000571422 1056 ntBASIC17.36■□□□□ 0.37
NKX6-1P78426 AC124016.1-201ENST00000609552 612 ntBASIC17.36■□□□□ 0.37
NKX6-1P78426 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX6-1P78426 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-1P78426 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX6-1P78426 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-1P78426 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.35■□□□□ 0.37
NKX6-1P78426 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 AC133681.1-201ENST00000465482 601 ntBASIC17.35■□□□□ 0.37
NKX6-1P78426 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX6-1P78426 AC023632.3-201ENST00000521633 145 ntBASIC17.35■□□□□ 0.37
NKX6-1P78426 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-1P78426 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-1P78426 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX6-1P78426 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.35■□□□□ 0.37
NKX6-1P78426 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NKX6-1P78426 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NKX6-1P78426 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX6-1P78426 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NKX6-1P78426 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-1P78426 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms