Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 KRT19P1-201ENST00000405746 1186 ntBASIC19.43■□□□□ 0.7
ABCE1P61221 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCE1P61221 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCE1P61221 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCE1P61221 AL591742.1-201ENST00000604433 565 ntBASIC19.43■□□□□ 0.7
ABCE1P61221 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCE1P61221 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCE1P61221 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ABCE1P61221 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCE1P61221 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCE1P61221 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCE1P61221 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 AL031963.3-201ENST00000606441 850 ntBASIC19.42■□□□□ 0.7
ABCE1P61221 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 MYCNOS-205ENST00000641950 531 ntBASIC19.42■□□□□ 0.7
ABCE1P61221 LINC01465-201ENST00000408887 1940 ntBASIC19.42■□□□□ 0.7
ABCE1P61221 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCE1P61221 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCE1P61221 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ABCE1P61221 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCE1P61221 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 AC120498.9-201ENST00000339021 3867 ntBASIC19.41■□□□□ 0.7
ABCE1P61221 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCE1P61221 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.41■□□□□ 0.7
ABCE1P61221 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCE1P61221 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.41■□□□□ 0.7
ABCE1P61221 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCE1P61221 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCE1P61221 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ABCE1P61221 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCE1P61221 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
ABCE1P61221 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ABCE1P61221 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCE1P61221 TERF1P5-201ENST00000477545 1207 ntBASIC19.4■□□□□ 0.7
ABCE1P61221 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCE1P61221 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCE1P61221 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ABCE1P61221 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 KRT8P20-201ENST00000423953 1409 ntBASIC19.4■□□□□ 0.7
ABCE1P61221 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCE1P61221 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ABCE1P61221 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms