Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 RARRES2P4-201ENST00000514074 484 ntBASIC18.38■□□□□ 0.53
CDH12P55289 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH12P55289 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CDH12P55289 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH12P55289 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH12P55289 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH12P55289 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH12P55289 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH12P55289 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.37■□□□□ 0.53
CDH12P55289 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.37■□□□□ 0.53
CDH12P55289 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH12P55289 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.37■□□□□ 0.53
CDH12P55289 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH12P55289 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH12P55289 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH12P55289 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDH12P55289 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDH12P55289 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDH12P55289 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH12P55289 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH12P55289 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH12P55289 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH12P55289 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 AL162430.1-201ENST00000480705 870 ntBASIC18.36■□□□□ 0.53
CDH12P55289 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH12P55289 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDH12P55289 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH12P55289 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH12P55289 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 Z82202.1-201ENST00000623446 1880 ntBASIC18.36■□□□□ 0.53
CDH12P55289 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH12P55289 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDH12P55289 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH12P55289 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH12P55289 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH12P55289 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH12P55289 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH12P55289 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CDH12P55289 AC009237.14-201ENST00000609975 1594 ntBASIC18.35■□□□□ 0.53
CDH12P55289 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH12P55289 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 MCRIP2P1-201ENST00000394346 511 ntBASIC18.35■□□□□ 0.53
CDH12P55289 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH12P55289 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH12P55289 AC100791.3-201ENST00000617619 330 ntBASIC18.35■□□□□ 0.53
CDH12P55289 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH12P55289 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH12P55289 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH12P55289 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms