Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN3P51790 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCN3P51790 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN3P51790 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN3P51790 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.77■■□□□ 1.07
CLCN3P51790 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN3P51790 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.76■■□□□ 1.07
CLCN3P51790 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLCN3P51790 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 AL391422.3-201ENST00000603791 2761 ntBASIC21.76■■□□□ 1.07
CLCN3P51790 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN3P51790 FEM1AP1-201ENST00000431297 1995 ntBASIC21.76■■□□□ 1.07
CLCN3P51790 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN3P51790 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLCN3P51790 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN3P51790 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN3P51790 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN3P51790 AC092667.1-201ENST00000434301 2586 ntBASIC21.75■■□□□ 1.07
CLCN3P51790 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN3P51790 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.75■■□□□ 1.07
CLCN3P51790 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN3P51790 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLCN3P51790 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN3P51790 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN3P51790 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLCN3P51790 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
CLCN3P51790 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CLCN3P51790 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.74■■□□□ 1.07
CLCN3P51790 AC087499.1-201ENST00000418141 1075 ntBASIC21.74■■□□□ 1.07
CLCN3P51790 KSR1P1-201ENST00000446298 240 ntBASIC21.74■■□□□ 1.07
CLCN3P51790 KRT18P16-201ENST00000510337 1294 ntBASIC21.74■■□□□ 1.07
CLCN3P51790 NUDT16P1-203ENST00000513809 620 ntBASIC21.74■■□□□ 1.07
CLCN3P51790 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.74■■□□□ 1.07
CLCN3P51790 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CLCN3P51790 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLCN3P51790 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN3P51790 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN3P51790 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN3P51790 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN3P51790 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN3P51790 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCN3P51790 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN3P51790 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.73■■□□□ 1.07
CLCN3P51790 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCN3P51790 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.73■■□□□ 1.07
CLCN3P51790 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.73■■□□□ 1.07
CLCN3P51790 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.73■■□□□ 1.07
CLCN3P51790 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.73■■□□□ 1.07
CLCN3P51790 REXO1L10P-201ENST00000615707 1290 ntBASIC21.73■■□□□ 1.07
CLCN3P51790 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN3P51790 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CLCN3P51790 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN3P51790 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 KRT16P1-201ENST00000399124 1418 ntBASIC21.72■■□□□ 1.07
CLCN3P51790 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN3P51790 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN3P51790 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 TUBB8P6-201ENST00000436895 1288 ntBASIC21.72■■□□□ 1.07
CLCN3P51790 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.72■■□□□ 1.07
CLCN3P51790 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN3P51790 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.72■■□□□ 1.07
CLCN3P51790 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN3P51790 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN3P51790 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms